pymatgen.io namespace
Subpackages
- pymatgen.io.abinit package
- Subpackages
- Submodules
- pymatgen.io.abinit.abiobjects module
AbivarAble
Constraints
Electrons
ElectronsAlgorithm
ExcHamiltonian
HilbertTransform
KSampling
KSamplingModes
ModelDielectricFunction
PPModel
PPModelModes
RelaxationMethod
Screening
SelfEnergy
Smearing
SpinMode
contract()
lattice_from_abivars()
species_by_znucl()
structure_from_abivars()
structure_to_abivars()
- pymatgen.io.abinit.abitimer module
AbinitTimer
AbinitTimer.cpuwall_histogram()
AbinitTimer.get_dataframe()
AbinitTimer.get_section()
AbinitTimer.get_values()
AbinitTimer.names_and_values()
AbinitTimer.ncpus
AbinitTimer.order_sections()
AbinitTimer.pie()
AbinitTimer.scatter_hist()
AbinitTimer.sum_sections()
AbinitTimer.to_csv()
AbinitTimer.to_table()
AbinitTimer.totable()
AbinitTimerParser
AbinitTimerParser.BEGIN_TAG
AbinitTimerParser.END_TAG
AbinitTimerParser.Error
AbinitTimerParser.filenames
AbinitTimerParser.get_sections()
AbinitTimerParser.parse()
AbinitTimerParser.pefficiency()
AbinitTimerParser.plot_all()
AbinitTimerParser.plot_efficiency()
AbinitTimerParser.plot_pie()
AbinitTimerParser.plot_stacked_hist()
AbinitTimerParser.section_names()
AbinitTimerParser.summarize()
AbinitTimerParser.timers()
AbinitTimerParser.walk()
AbinitTimerParserError
AbinitTimerSection
ParallelEfficiency
alternate()
- pymatgen.io.abinit.inputs module
AbstractInput
BasicAbinitInput
BasicAbinitInput.Error
BasicAbinitInput.add_abiobjects()
BasicAbinitInput.as_dict()
BasicAbinitInput.comment
BasicAbinitInput.from_dict()
BasicAbinitInput.isnc
BasicAbinitInput.ispaw
BasicAbinitInput.new_with_vars()
BasicAbinitInput.pop_irdvars()
BasicAbinitInput.pop_tolerances()
BasicAbinitInput.pseudos
BasicAbinitInput.set_comment()
BasicAbinitInput.set_gamma_sampling()
BasicAbinitInput.set_kmesh()
BasicAbinitInput.set_kpath()
BasicAbinitInput.set_spin_mode()
BasicAbinitInput.set_structure()
BasicAbinitInput.structure
BasicAbinitInput.to_string()
BasicAbinitInput.vars
BasicAbinitInputError
BasicMultiDataset
BasicMultiDataset.Error
BasicMultiDataset.addnew_from()
BasicMultiDataset.append()
BasicMultiDataset.deepcopy()
BasicMultiDataset.extend()
BasicMultiDataset.from_inputs()
BasicMultiDataset.has_same_structures
BasicMultiDataset.isnc
BasicMultiDataset.ispaw
BasicMultiDataset.ndtset
BasicMultiDataset.pseudos
BasicMultiDataset.replicate_input()
BasicMultiDataset.split_datasets()
BasicMultiDataset.to_string()
BasicMultiDataset.write()
ShiftMode
as_structure()
calc_shiftk()
ebands_input()
gs_input()
ion_ioncell_relax_input()
num_valence_electrons()
- pymatgen.io.abinit.netcdf module
- pymatgen.io.abinit.pseudos module
Pseudo
Pseudo.Z
Pseudo.Z_val
Pseudo.as_dict()
Pseudo.as_pseudo()
Pseudo.as_tmpfile()
Pseudo.basename
Pseudo.compute_md5()
Pseudo.djrepo_path
Pseudo.element
Pseudo.filepath
Pseudo.from_dict()
Pseudo.from_file()
Pseudo.has_dojo_report
Pseudo.has_hints
Pseudo.hint_for_accuracy()
Pseudo.isnc
Pseudo.ispaw
Pseudo.l_local
Pseudo.l_max
Pseudo.md5()
Pseudo.open_pspsfile()
Pseudo.summary
Pseudo.supports_soc
Pseudo.symbol
Pseudo.to_string()
Pseudo.type
PseudoTable
PseudoTable.all_combinations_for_elements()
PseudoTable.allnc
PseudoTable.allpaw
PseudoTable.as_dict()
PseudoTable.as_table()
PseudoTable.from_dict()
PseudoTable.from_dir()
PseudoTable.get_pseudos_for_structure()
PseudoTable.is_complete()
PseudoTable.print_table()
PseudoTable.pseudo_with_symbol()
PseudoTable.pseudos_with_symbols()
PseudoTable.select()
PseudoTable.select_family()
PseudoTable.select_rows()
PseudoTable.select_symbols()
PseudoTable.sort_by_z()
PseudoTable.sorted()
PseudoTable.to_table()
PseudoTable.with_dojo_report()
PseudoTable.zlist
- pymatgen.io.abinit.variable module
- pymatgen.io.abinit.abiobjects module
- Module contents
- Subpackages
- pymatgen.io.cp2k package
- Subpackages
- Submodules
- pymatgen.io.cp2k.inputs module
AtomicMetadata
AtomicMetadata.info
AtomicMetadata.element
AtomicMetadata.potential
AtomicMetadata.name
AtomicMetadata.alias_names
AtomicMetadata.filename
AtomicMetadata.version
AtomicMetadata.alias_names
AtomicMetadata.element
AtomicMetadata.filename
AtomicMetadata.get_hash()
AtomicMetadata.get_string()
AtomicMetadata.info
AtomicMetadata.name
AtomicMetadata.potential
AtomicMetadata.softmatch()
AtomicMetadata.version
Band_Structure
BasisFile
BasisInfo
BasisInfo.electrons
BasisInfo.core
BasisInfo.valence
BasisInfo.polarization
BasisInfo.diffuse
BasisInfo.cc
BasisInfo.pc
BasisInfo.sr
BasisInfo.molopt
BasisInfo.admm
BasisInfo.lri
BasisInfo.contracted
BasisInfo.xc
BasisInfo.admm
BasisInfo.cc
BasisInfo.contracted
BasisInfo.core
BasisInfo.diffuse
BasisInfo.electrons
BasisInfo.from_string()
BasisInfo.lri
BasisInfo.molopt
BasisInfo.pc
BasisInfo.polarization
BasisInfo.softmatch()
BasisInfo.sr
BasisInfo.valence
BasisInfo.xc
BrokenSymmetry
Cell
Coord
Cp2kInput
DOS
DataFile
Davidson
Dft
DftPlusU
Diagonalization
E_Density_Cube
ForceEval
GaussianTypeOrbitalBasisSet
GaussianTypeOrbitalBasisSet.info
GaussianTypeOrbitalBasisSet.nset
GaussianTypeOrbitalBasisSet.n
GaussianTypeOrbitalBasisSet.lmax
GaussianTypeOrbitalBasisSet.lmin
GaussianTypeOrbitalBasisSet.nshell
GaussianTypeOrbitalBasisSet.exponents
GaussianTypeOrbitalBasisSet.coefficients
GaussianTypeOrbitalBasisSet.coefficients
GaussianTypeOrbitalBasisSet.exponents
GaussianTypeOrbitalBasisSet.from_string()
GaussianTypeOrbitalBasisSet.get_keyword()
GaussianTypeOrbitalBasisSet.get_string()
GaussianTypeOrbitalBasisSet.info
GaussianTypeOrbitalBasisSet.lmax
GaussianTypeOrbitalBasisSet.lmin
GaussianTypeOrbitalBasisSet.n
GaussianTypeOrbitalBasisSet.nexp
GaussianTypeOrbitalBasisSet.nset
GaussianTypeOrbitalBasisSet.nshell
Global
GthPotential
GthPotential.info
GthPotential.n_elecs
GthPotential.r_loc
GthPotential.nexp_ppl
GthPotential.c_exp_ppl
GthPotential.radii
GthPotential.nprj
GthPotential.nprj_ppnl
GthPotential.hprj_ppnl
GthPotential.c_exp_ppl
GthPotential.from_section()
GthPotential.from_string()
GthPotential.get_keyword()
GthPotential.get_section()
GthPotential.get_string()
GthPotential.hprj_ppnl
GthPotential.n_elecs
GthPotential.nexp_ppl
GthPotential.nprj
GthPotential.nprj_ppnl
GthPotential.r_loc
GthPotential.radii
Keyword
KeywordList
Kind
Kpoint_Set
Kpoints
LDOS
MO_Cubes
Mgrid
OrbitalTransformation
PBE
PDOS
PotentialFile
PotentialInfo
QS
Scf
Section
SectionList
Smear
Subsys
V_Hartree_Cube
Xc_Functional
- pymatgen.io.cp2k.outputs module
Cp2kOutput
Cp2kOutput.as_dict()
Cp2kOutput.band_structure
Cp2kOutput.calculation_type
Cp2kOutput.charge
Cp2kOutput.complete_dos
Cp2kOutput.completed
Cp2kOutput.convergence()
Cp2kOutput.cp2k_version
Cp2kOutput.is_hubbard
Cp2kOutput.is_metal
Cp2kOutput.is_molecule
Cp2kOutput.multiplicity
Cp2kOutput.num_warnings
Cp2kOutput.parse_atomic_kind_info()
Cp2kOutput.parse_bandstructure()
Cp2kOutput.parse_cell_params()
Cp2kOutput.parse_chi_tensor()
Cp2kOutput.parse_cp2k_params()
Cp2kOutput.parse_dft_params()
Cp2kOutput.parse_dos()
Cp2kOutput.parse_energies()
Cp2kOutput.parse_files()
Cp2kOutput.parse_forces()
Cp2kOutput.parse_global_params()
Cp2kOutput.parse_gtensor()
Cp2kOutput.parse_hirshfeld()
Cp2kOutput.parse_homo_lumo()
Cp2kOutput.parse_hyperfine()
Cp2kOutput.parse_initial_structure()
Cp2kOutput.parse_input()
Cp2kOutput.parse_ionic_steps()
Cp2kOutput.parse_mo_eigenvalues()
Cp2kOutput.parse_mulliken()
Cp2kOutput.parse_nmr_shift()
Cp2kOutput.parse_opt_steps()
Cp2kOutput.parse_overlap_condition()
Cp2kOutput.parse_plus_u_params()
Cp2kOutput.parse_qs_params()
Cp2kOutput.parse_raman()
Cp2kOutput.parse_scf_opt()
Cp2kOutput.parse_scf_params()
Cp2kOutput.parse_stresses()
Cp2kOutput.parse_structures()
Cp2kOutput.parse_tddfpt()
Cp2kOutput.parse_timing()
Cp2kOutput.parse_total_numbers()
Cp2kOutput.project_name
Cp2kOutput.ran_successfully()
Cp2kOutput.read_pattern()
Cp2kOutput.read_table_pattern()
Cp2kOutput.run_type
Cp2kOutput.spin_polarized
parse_dos()
parse_energy_file()
parse_pdos()
- pymatgen.io.cp2k.sets module
CellOptSet
Cp2kValidationError
DftSet
DftSet.activate_epr()
DftSet.activate_fast_minimization()
DftSet.activate_hybrid()
DftSet.activate_hyperfine()
DftSet.activate_localize()
DftSet.activate_motion()
DftSet.activate_nmr()
DftSet.activate_nonperiodic()
DftSet.activate_polar()
DftSet.activate_robust_minimization()
DftSet.activate_spinspin()
DftSet.activate_tddfpt()
DftSet.activate_vdw_potential()
DftSet.activate_very_strict_minimization()
DftSet.create_subsys()
DftSet.get_basis_and_potential()
DftSet.get_cutoff_from_basis()
DftSet.get_xc_functionals()
DftSet.modify_dft_print_iters()
DftSet.print_bandstructure()
DftSet.print_dos()
DftSet.print_e_density()
DftSet.print_forces()
DftSet.print_hirshfeld()
DftSet.print_ldos()
DftSet.print_mo()
DftSet.print_mo_cubes()
DftSet.print_mulliken()
DftSet.print_pdos()
DftSet.print_v_hartree()
DftSet.set_charge()
DftSet.validate()
DftSet.write_basis_set_file()
DftSet.write_potential_file()
HybridCellOptSet
HybridRelaxSet
HybridStaticSet
RelaxSet
StaticSet
- pymatgen.io.cp2k.utils module
- pymatgen.io.cp2k.inputs module
- Module contents
- Subpackages
- pymatgen.io.exciting package
- pymatgen.io.feff package
- Subpackages
- Submodules
- Module contents
- Subpackages
- pymatgen.io.lammps package
- Subpackages
- Submodules
- pymatgen.io.lammps.data module
- pymatgen.io.lammps.generators module
- pymatgen.io.lammps.inputs module
LammpsInputFile
LammpsInputFile.add_commands()
LammpsInputFile.add_stage()
LammpsInputFile.append()
LammpsInputFile.contains_command()
LammpsInputFile.from_file()
LammpsInputFile.from_string()
LammpsInputFile.get_args()
LammpsInputFile.get_string()
LammpsInputFile.merge_stages()
LammpsInputFile.ncomments
LammpsInputFile.nstages
LammpsInputFile.remove_command()
LammpsInputFile.remove_stage()
LammpsInputFile.rename_stage()
LammpsInputFile.set_args()
LammpsInputFile.stages_names
LammpsInputFile.write_file()
LammpsRun
LammpsTemplateGen
- pymatgen.io.lammps.outputs module
- pymatgen.io.lammps.sets module
- pymatgen.io.lammps.utils module
- Module contents
- Subpackages
- pymatgen.io.lobster package
- Subpackages
- Submodules
- pymatgen.io.lobster.inputs module
Lobsterin
Lobsterin.AVAILABLEKEYWORDS
Lobsterin.BOOLEANKEYWORDS
Lobsterin.FLOATKEYWORDS
Lobsterin.LISTKEYWORDS
Lobsterin.STRINGKEYWORDS
Lobsterin.as_dict()
Lobsterin.diff()
Lobsterin.from_dict()
Lobsterin.from_file()
Lobsterin.get_all_possible_basis_functions()
Lobsterin.get_basis()
Lobsterin.standard_calculations_from_vasp_files()
Lobsterin.write_INCAR()
Lobsterin.write_KPOINTS()
Lobsterin.write_POSCAR_with_standard_primitive()
Lobsterin.write_lobsterin()
get_all_possible_basis_combinations()
- pymatgen.io.lobster.lobsterenv module
LobsterLightStructureEnvironments
LobsterNeighbors
LobsterNeighbors.get_anion_types()
LobsterNeighbors.get_info_cohps_to_neighbors()
LobsterNeighbors.get_info_icohps_between_neighbors()
LobsterNeighbors.get_info_icohps_to_neighbors()
LobsterNeighbors.get_light_structure_environment()
LobsterNeighbors.get_nn_info()
LobsterNeighbors.molecules_allowed
LobsterNeighbors.plot_cohps_of_neighbors()
LobsterNeighbors.structures_allowed
- pymatgen.io.lobster.outputs module
- pymatgen.io.lobster.inputs module
- Module contents
- Subpackages
- pymatgen.io.qchem package
- Subpackages
- Submodules
- pymatgen.io.qchem.inputs module
QCInput
QCInput.almo_template()
QCInput.cdft_template()
QCInput.find_sections()
QCInput.from_file()
QCInput.from_multi_jobs_file()
QCInput.from_string()
QCInput.geom_opt_template()
QCInput.get_string()
QCInput.molecule_template()
QCInput.multi_job_string()
QCInput.nbo_template()
QCInput.opt_template()
QCInput.pcm_nonels_template()
QCInput.pcm_template()
QCInput.plots_template()
QCInput.read_almo()
QCInput.read_cdft()
QCInput.read_geom_opt()
QCInput.read_molecule()
QCInput.read_nbo()
QCInput.read_opt()
QCInput.read_pcm()
QCInput.read_pcm_nonels()
QCInput.read_plots()
QCInput.read_rem()
QCInput.read_scan()
QCInput.read_smx()
QCInput.read_solvent()
QCInput.read_svp()
QCInput.read_vdw()
QCInput.rem_template()
QCInput.scan_template()
QCInput.smx_template()
QCInput.solvent_template()
QCInput.svp_template()
QCInput.van_der_waals_template()
QCInput.write_multi_job_file()
- pymatgen.io.qchem.outputs module
- pymatgen.io.qchem.sets module
- pymatgen.io.qchem.utils module
- pymatgen.io.qchem.inputs module
- Module contents
- Subpackages
- pymatgen.io.vasp package
- Subpackages
- Submodules
- pymatgen.io.vasp.help module
- pymatgen.io.vasp.inputs module
BadIncarWarning
Incar
Kpoints
Kpoints.as_dict()
Kpoints.automatic()
Kpoints.automatic_density()
Kpoints.automatic_density_by_lengths()
Kpoints.automatic_density_by_vol()
Kpoints.automatic_gamma_density()
Kpoints.automatic_linemode()
Kpoints.from_dict()
Kpoints.from_file()
Kpoints.from_string()
Kpoints.gamma_automatic()
Kpoints.monkhorst_automatic()
Kpoints.style
Kpoints.supported_modes
Kpoints.write_file()
Kpoints_supported_modes
Orbital
OrbitalDescription
Poscar
Poscar.structure
Poscar.comment
Poscar.true_names
Poscar.selective_dynamics
Poscar.velocities
Poscar.predictor_corrector
Poscar.predictor_corrector_preamble
Poscar.temperature
Poscar.as_dict()
Poscar.from_dict()
Poscar.from_file()
Poscar.from_string()
Poscar.get_string()
Poscar.natoms
Poscar.predictor_corrector
Poscar.selective_dynamics
Poscar.set_temperature()
Poscar.site_symbols
Poscar.velocities
Poscar.write_file()
Potcar
PotcarSingle
PotcarSingle.data
PotcarSingle.keywords
PotcarSingle.atomic_no
PotcarSingle.electron_configuration
PotcarSingle.element
PotcarSingle.from_file()
PotcarSingle.from_symbol_and_functional()
PotcarSingle.functional
PotcarSingle.functional_class
PotcarSingle.functional_dir
PotcarSingle.functional_tags
PotcarSingle.get_potcar_file_hash()
PotcarSingle.get_potcar_hash()
PotcarSingle.get_sha256_file_hash()
PotcarSingle.identify_potcar()
PotcarSingle.nelectrons
PotcarSingle.parse_functions
PotcarSingle.potential_type
PotcarSingle.symbol
PotcarSingle.verify_potcar()
PotcarSingle.write_file()
UnknownPotcarWarning
VaspInput
- pymatgen.io.vasp.optics module
DielectricFunctionCalculator
DielectricFunctionCalculator.cder
DielectricFunctionCalculator.cder_imag
DielectricFunctionCalculator.cder_real
DielectricFunctionCalculator.cshift
DielectricFunctionCalculator.deltae
DielectricFunctionCalculator.efermi
DielectricFunctionCalculator.eigs
DielectricFunctionCalculator.from_directory()
DielectricFunctionCalculator.from_vasp_objects()
DielectricFunctionCalculator.get_epsilon()
DielectricFunctionCalculator.ismear
DielectricFunctionCalculator.ispin
DielectricFunctionCalculator.kweights
DielectricFunctionCalculator.nedos
DielectricFunctionCalculator.plot_weighted_transition_data()
DielectricFunctionCalculator.sigma
DielectricFunctionCalculator.volume
delta_func()
delta_methfessel_paxton()
epsilon_imag()
get_delta()
get_step()
kramers_kronig()
step_func()
step_methfessel_paxton()
- pymatgen.io.vasp.outputs module
BSVasprun
Chgcar
Dynmat
Eigenval
Elfcar
Locpot
Oszicar
Outcar
Outcar.magnetization
Outcar.chemical_shielding
Outcar.unsym_cs_tensor
Outcar.cs_g0_contribution
Outcar.cs_core_contribution
Outcar.efg
Outcar.charge
Outcar.is_stopped
Outcar.run_stats
Outcar.elastic_tensor
Outcar.drift
Outcar.ngf
Outcar.efermi
Outcar.filename
Outcar.final_energy
Outcar.final_energy_wo_entrp
Outcar.final_fr_energy
Outcar.has_onsite_density_matrices
Outcar.lcalcpol
Outcar.lepsilon
Outcar.nelect
Outcar.spin
Outcar.total_mag
Outcar.as_dict()
Outcar.read_avg_core_poten()
Outcar.read_chemical_shielding()
Outcar.read_core_state_eigen()
Outcar.read_corrections()
Outcar.read_cs_core_contribution()
Outcar.read_cs_g0_contribution()
Outcar.read_cs_raw_symmetrized_tensors()
Outcar.read_elastic_tensor()
Outcar.read_electrostatic_potential()
Outcar.read_fermi_contact_shift()
Outcar.read_freq_dielectric()
Outcar.read_igpar()
Outcar.read_internal_strain_tensor()
Outcar.read_lcalcpol()
Outcar.read_lepsilon()
Outcar.read_lepsilon_ionic()
Outcar.read_neb()
Outcar.read_nmr_efg()
Outcar.read_nmr_efg_tensor()
Outcar.read_onsite_density_matrices()
Outcar.read_pattern()
Outcar.read_piezo_tensor()
Outcar.read_pseudo_zval()
Outcar.read_table_pattern()
Procar
UnconvergedVASPWarning
VaspParserError
Vasprun
Vasprun.ionic_steps
Vasprun.tdos
Vasprun.idos
Vasprun.pdos
Vasprun.efermi
Vasprun.eigenvalues
Vasprun.projected_eigenvalues
Vasprun.projected_magnetisation
Vasprun.other_dielectric
Vasprun.nionic_steps
Vasprun.force_constants
Vasprun.normalmode_eigenvals
Vasprun.normalmode_eigenvecs
Vasprun.md_data
Vasprun.incar
Vasprun.parameters
Vasprun.kpoints
Vasprun.actual_kpoints
Vasprun.actual_kpoints_weights
Vasprun.atomic_symbols
Vasprun.potcar_symbols
Vasprun.as_dict()
Vasprun.calculate_efermi()
Vasprun.complete_dos
Vasprun.complete_dos_normalized
Vasprun.converged
Vasprun.converged_electronic
Vasprun.converged_ionic
Vasprun.dielectric
Vasprun.eigenvalue_band_properties
Vasprun.epsilon_ionic
Vasprun.epsilon_static
Vasprun.epsilon_static_wolfe
Vasprun.final_energy
Vasprun.get_band_structure()
Vasprun.get_computed_entry()
Vasprun.get_potcars()
Vasprun.get_trajectory()
Vasprun.hubbards
Vasprun.is_hubbard
Vasprun.is_spin
Vasprun.optical_absorption_coeff
Vasprun.run_type
Vasprun.structures
Vasprun.update_charge_from_potcar()
Vasprun.update_potcar_spec()
VolumetricData
WSWQ
Wavecar
Waveder
Xdatcar
get_adjusted_fermi_level()
get_band_structure_from_vasp_multiple_branches()
- pymatgen.io.vasp.sets module
BadInputSetWarning
DictSet
LobsterSet
MITMDSet
MITNEBSet
MITRelaxSet
MPAbsorptionSet
MPHSEBSSet
MPHSERelaxSet
MPMDSet
MPMetalRelaxSet
MPNMRSet
MPNonSCFSet
MPRelaxSet
MPSOCSet
MPScanRelaxSet
MPScanStaticSet
MPStaticSet
MVLElasticSet
MVLGBSet
MVLGWSet
MVLNPTMDSet
MVLRelax52Set
MVLScanRelaxSet
MVLSlabSet
VaspInputSet
batch_write_input()
get_structure_from_prev_run()
get_valid_magmom_struct()
get_vasprun_outcar()
next_num_with_prime_factors()
primes_less_than()
standardize_structure()
- Module contents
- Subpackages
- pymatgen.io.xtb package
Submodules
- pymatgen.io.adf module
- pymatgen.io.ase module
- pymatgen.io.atat module
- pymatgen.io.babel module
BabelMolAdaptor
BabelMolAdaptor.add_hydrogen()
BabelMolAdaptor.confab_conformers()
BabelMolAdaptor.from_file()
BabelMolAdaptor.from_molecule_graph()
BabelMolAdaptor.from_string()
BabelMolAdaptor.gen3d_conformer()
BabelMolAdaptor.localopt()
BabelMolAdaptor.make3d()
BabelMolAdaptor.openbabel_mol
BabelMolAdaptor.pybel_mol
BabelMolAdaptor.pymatgen_mol
BabelMolAdaptor.remove_bond()
BabelMolAdaptor.rotor_conformer()
BabelMolAdaptor.write_file()
- pymatgen.io.cif module
- pymatgen.io.common module
VolumetricData
VolumetricData.structure
VolumetricData.ngridpts
VolumetricData.copy()
VolumetricData.from_cube()
VolumetricData.from_hdf5()
VolumetricData.get_average_along_axis()
VolumetricData.get_axis_grid()
VolumetricData.get_integrated_diff()
VolumetricData.linear_add()
VolumetricData.linear_slice()
VolumetricData.scale()
VolumetricData.spin_data
VolumetricData.to_cube()
VolumetricData.to_hdf5()
VolumetricData.value_at()
- pymatgen.io.core module
- pymatgen.io.cssr module
- pymatgen.io.fiesta module
BSEOutput
BasisSetReader
FiestaInput
FiestaInput.as_dict()
FiestaInput.dump_BSE_data_in_GW_run()
FiestaInput.dump_TDDFT_data_in_GW_run()
FiestaInput.from_dict()
FiestaInput.from_file()
FiestaInput.from_string()
FiestaInput.infos_on_system
FiestaInput.make_FULL_BSE_Densities_folder()
FiestaInput.molecule
FiestaInput.set_BSE_options()
FiestaInput.set_GW_options()
FiestaInput.set_auxiliary_basis_set()
FiestaInput.write_file()
FiestaOutput
FiestaRun
Nwchem2Fiesta
- pymatgen.io.gaussian module
GaussianInput
GaussianOutput
GaussianOutput.structures_input_orientation
GaussianOutput.opt_structures
GaussianOutput.energies
GaussianOutput.eigenvalues
GaussianOutput.MO_coefficients
GaussianOutput.cart_forces
GaussianOutput.frequencies
GaussianOutput.hessian
GaussianOutput.properly_terminated
GaussianOutput.is_pcm
GaussianOutput.is_spin
GaussianOutput.stationary_type
GaussianOutput.corrections
GaussianOutput.functional
GaussianOutput.basis_set
GaussianOutput.route
GaussianOutput.dieze_tag
GaussianOutput.link0
GaussianOutput.charge
GaussianOutput.spin_multiplicity
GaussianOutput.num_basis_func
GaussianOutput.electrons
GaussianOutput.pcm
GaussianOutput.errors
GaussianOutput.Mulliken_charges
GaussianOutput.eigenvectors
GaussianOutput.molecular_orbital
GaussianOutput.atom_basis_labels
GaussianOutput.resumes
GaussianOutput.title
GaussianOutput.standard_orientation
GaussianOutput.bond_orders
GaussianOutput.read_scan()
GaussianOutput.get_scan_plot()
GaussianOutput.save_scan_plot()
GaussianOutput.as_dict()
GaussianOutput.final_energy
GaussianOutput.final_structure
GaussianOutput.get_scan_plot()
GaussianOutput.get_spectre_plot()
GaussianOutput.read_excitation_energies()
GaussianOutput.read_scan()
GaussianOutput.save_scan_plot()
GaussianOutput.save_spectre_plot()
GaussianOutput.to_input()
read_route_line()
- pymatgen.io.jarvis module
- pymatgen.io.lmto module
- pymatgen.io.nwchem module
- pymatgen.io.packmol module
- pymatgen.io.phonopy module
eigvec_to_eigdispl()
get_complete_ph_dos()
get_displaced_structures()
get_gruneisen_ph_bs_symm_line()
get_gruneisenparameter()
get_gs_ph_bs_symm_line_from_dict()
get_ph_bs_symm_line()
get_ph_bs_symm_line_from_dict()
get_ph_dos()
get_phonon_band_structure_from_fc()
get_phonon_band_structure_symm_line_from_fc()
get_phonon_dos_from_fc()
get_phonopy_structure()
get_pmg_structure()
get_structure_from_dict()
get_thermal_displacement_matrices()
- pymatgen.io.prismatic module
- pymatgen.io.pwscf module
- pymatgen.io.res module
AirssProvider
AirssProvider.appearances
AirssProvider.as_dict()
AirssProvider.energy
AirssProvider.entry
AirssProvider.from_file()
AirssProvider.from_str()
AirssProvider.get_airss_version()
AirssProvider.get_castep_version()
AirssProvider.get_cut_grid_gmax_fsbc()
AirssProvider.get_func_rel_disp()
AirssProvider.get_mpgrid_offset_nkpts_spacing()
AirssProvider.get_pspots()
AirssProvider.get_run_start_info()
AirssProvider.integrated_absolute_spin_density
AirssProvider.integrated_spin_density
AirssProvider.pressure
AirssProvider.seed
AirssProvider.spacegroup_label
AirssProvider.volume
ParseError
ResError
ResIO
ResProvider
ResWriter
- pymatgen.io.shengbte module
- pymatgen.io.template module
- pymatgen.io.wannier90 module
- pymatgen.io.xcrysden module
- pymatgen.io.xr module
- pymatgen.io.xyz module
- pymatgen.io.zeopp module